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Arabidopsis thaliana v11*
Eucalyptus grandis v2.0*
Picea abies v1.0*
Populus tremula v2.2*
Aquilegia coerulea v3.1
Artemisia annua v1
Beta vulgaris v1.2
Betula pendula 1.4c
Camellia sinensis AHAU_CSS_2
Cinnamomum kanehirae v1.0
Cucumis sativus v1.0
Ginkgo biloba 2016
Gnetum montanum
Handroanthus impetiginosus
Malania oleifera
Malus domestica v2.0
Medicago truncatula mt4.0v1
Mimulus guttatus v2.0
Nicotiana tabacum v4.5 (Edwards 2017)
Parasponia andersonii v1.0
Physcomitrella patens v3.3
Pinus lambertiana v1.0
Pinus taeda v2.01
Populus euphratica v2.0
Populus tremula X tremuloides v1.0
Populus tremuloides v1.1
Populus trichocarpa v3.1
Pseudotsuga menziesii v1.0
Salix purpurea v1.0
Vitis vinifera genoscope12x
Xanthoceras sorbifolium v2f
Zostera marina v2.2
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Load example:
BLAST program:
BLASTN - nucleotide query to nucleotide db
BLASTX - translated (6 frames) nucl. query to protein db
BLASTP - protein query to protein db
TBLASTN - protein query to translated (6 frames) nt db
TBLASTX - transl. (6 frames) nucl. query to transl (6) nt db
Query sequence:
Upload File:
Select Blast DB:
+ Settings
Scoring matrix:
BLOSUM62
PAM30
PAM70
BLOSUM80
BLOSUM45
Filtering:
Low complexity
Lower-case letters
E-value cutoff:
1e-3
1e-30
1e-10
1e-5
0.1
0
10
100
1000
Advanced Options:
ungapped
megablast
Query genetic code:
Standard
Vertebrate Mitochondrial
Yeast Mitochondrial
Mold, Protozoan, and Coelocoel Mitochondrial
Invertebrate Mitochondrial
Ciliate Nuclear
Echinoderm Mitochondrial
Euplotid Nuclear
Bacterial
Alternative Yeast Nuclear
Ascidian Mitochondrial
Flatworm Mitochondrial
Blepharisma Macronuclear
DB genetic code:
Standard
Vertebrate Mitochondrial
Yeast Mitochondrial
Mold, Protozoan, and Coelocoel Mitochondrial
Invertebrate Mitochondrial
Ciliate Nuclear
Echinoderm Mitochondrial
Euplotid Nuclear
Bacterial
Alternative Yeast Nuclear
Ascidian Mitochondrial
Flatworm Mitochondrial
Blepharisma Macronuclear
Frame shift penalty:
Word size:
Number of results per sequence:
50
10
100
1
BLAST
Results..
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